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We found Websites Listing below when search with dcc.blueprint-epigenome.eu on Search Engine
Blueprint Epigenome - Access to BLUEPRINT data
* the Blueprint DCC portal Sequence reads and alignments for Blueprint datasets are held within the European Genome-phenome Archive. For further information regarding the EGA, please see their website, or contact [email protected]. Reuse of any Blueprint data, including but not limited to that archived with the EGA is subject to the Blueprint data reuse …
Blueprint-epigenome.euBlueprint Epigenome - Epigenomic data
Blueprint Epigenome - Epigenomic data. Epigenomic data. The overall ambitious goal of the BLUEPRINT project is to generate at least 100 reference epigenomes of distinct types of haematopoietic cells from healthy individuals and of their malignant leukaemic counterparts. In the first stage, references epigenomes for some of the most abundant ...
Blueprint-epigenome.euBlueprint Epigenome - Access to BLUEPRINT data
Blueprint Epigenome - Access to BLUEPRINT data. BLUEPRINT data. T he overall ambitious goal of the BLUEPRINT project is to generate at least 100 reference epigenomes of distinct types of haematopoietic cells from healthy individuals and their malignant counterparts. So far isolated cells from 11 Bone marrow, 64 Venous blood, 46 Cord blood, 1 ...
Blueprint-epigenome.euBlueprint data access guidance 20180928 - Blueprint …
Guidance for applications to access to the Blueprint Data Researchers who wish to access the genetic and phenotype data generated by the Blueprint Consortium, which is held within the European Genome Phenome Archive (EGA), are required to apply to the Blueprint Data Access Committee (DAC) for permission to access the data.
Blueprint-epigenome.euPress Release - blueprint-epigenome.eu
EU-FP7 project BLUEPRINT celebrates major manuscript release BLUEPRINT scientists release a collection of 26 publications in Cell, Cell Press-associated and other high-impact journals. These are part of a package of 41 publications by the International Human Epigenome Consortium (IHEC) of which BLUEPRINT is a member.
Blueprint-epigenome.euDeepBlue epigenomic data server: programmatic data ...
2016-04-15 · It contains data from four major epigenome projects, namely ENCODE, ROADMAP, BLUEPRINT and DEEP. DeepBlue comes with a user manual, examples and a well-documented application programming interface (API). The latter is accessed via the XML-RPC protocol supported by many programming languages. To demonstrate usage of the API and to enable …
Academic.oup.comE-MTAB-3819 - RNA-Seq of polyA mRNA from rare types of ...
2015-09-30 · Strand-specific RNA-Seq of rRNA-depleted total RNA from common types of cultured or uncultured primary cells of different haemopoetic lineages from healthy individuals in the BLUEPRINT epigenome project
Omicsdi.orgE-MTAB-3827 - Strand-specific RNA-Seq of rRNA-depleted ...
2015-09-30 · Strand-specific RNA-Seq of rRNA-depleted total RNA from common types of cultured or uncultured primary cells of different haemopoetic lineages from healthy individuals in the BLUEPRINT epigenome project
Omicsdi.orgE-MTAB-4754 - RNA-Seq of polyA mRNA from plasma cells of ...
2016-05-12 · Strand-specific RNA-Seq of rRNA-depleted total RNA from common types of cultured or uncultured primary cells of different haemopoetic lineages from healthy individuals in the BLUEPRINT epigenome project
Omicsdi.orgSupplementary Materials for
Email: [email protected] Published 27 March 2019, Sci. Transl. Med. 11, eaau7746 (2019) DOI: 10.1126/scitranslmed.aau7746 The PDF file includes: Materials and Methods Fig. S1. SDC1 (CD138) and GPRC5D mRNA expression. Fig. S2. Correlation of higher GPRC5D expression by MM cells with shorter progression-free survival. Fig. S3. GPRC5D protein expression on …
Science.orgGEO Accession viewer
Email GEO NCBI > GEO > Accession Display: Not logged in | Login: GEO help: Mouse over screen elements for information. Scope: Format: Amount: GEO accession: Sample GSM5001895: Query DataSets for GSM5001895: Status: Public on Apr 16, 2021: Title: Jurkat_Input: Sample type: SRA : Source name: Jurkat T-cell line: Organism: Homo sapiens: Characteristics: cell …
Ncbi.nlm.nih.govEGAC00001002150 - The Xq22.3 contiguous gene deletion ...
Data Access Committee EGAC00001002150. Strand-specific RNA-Seq of rRNA-depleted total RNA from common types of cultured or uncultured primary cells of different haemopoetic lineages from healthy individuals in the BLUEPRINT epigenome project
Omicsdi.orgDifferential expression and regulation of MS4A family ...
2021-08-04 · RNA-Seq data relative to PBMC cells in normal condition, produced within the large data collection belonging to the Blueprint consortium under the accession ID EGAS00001000284 and EGAS00001000327, 42-44 were retrieved upon previous request from The European Genome-Phenome Archive (EGA) through the pyega3 application. The 3 cohorts were …
Jlb.onlinelibrary.wiley.comOCHROdb: a comprehensive, quality checked ... - bioRxiv
Regulation and Blueprint Epigenome have made large-scale datasets of open chromatin regions publicly available. While these datasets are extremely useful for studying mechanisms of gene regulation in disease and cell development, they only identify open chromatin regions in individual samples. A uniform comparison of accessibility of the same regulatory sites across multiple …
Biorxiv.orgEGAC00001001587 - Center for Technology Licensing at ...
Data Access Committee EGAC00001001587. Strand-specific RNA-Seq of rRNA-depleted total RNA from common types of cultured or uncultured primary cells of different haemopoetic lineages from healthy individuals in the BLUEPRINT epigenome project
Omicsdi.orgEGAC00001000865 - The APL DAC comprises a clinician and ...
Strand-specific RNA-Seq of rRNA-depleted total RNA from common types of cultured or uncultured primary cells of different haemopoetic lineages from healthy individuals in the BLUEPRINT epigenome project
Omicsdi.orgGEO Accession viewer
Email GEO NCBI > GEO > Accession Display: Not logged in | Login: GEO help: Mouse over screen elements for information. Scope: Format: Amount: GEO accession: Sample GSM5001894: Query DataSets for GSM5001894: Status: Public on Apr 16, 2021: Title: Jurkat_H3K4me3_DMSO_Spike: Sample type: SRA : Source name: Jurkat T-cell line: …
Ncbi.nlm.nih.govE-MTAB-3819 < Browse < ArrayExpress < EMBL-EBI
Optionally please enter your email address if you wish to get a response. ArrayExpress; Browse; E-MTAB-3819; E-MTAB-3819 - RNA-Seq of polyA mRNA from rare types of cultured or uncultured primary cells of different haemopoetic lineages from healthy individuals in the BLUEPRINT epigenome project . Status. Released on 30 September 2015, last updated on …
Ebi.ac.ukComprehensive mapping of the human cytokine gene ...
INTRODUCTION. Transcriptional regulation of cytokine genes plays a central role in the development of the immune system, responses to pathogens, and inflammation (1, 2).Indeed, dysregulation of cytokine expression, caused by mutations in cytokine gene regulatory regions, transcription factors (TFs) and genes belonging to upstream signaling pathways that impinge …
Academic.oup.comCorrupted coordination of ... - Nature Communications
2019-04-23 · Previously published CLL and normal B cell ChIP-seq and RNA-seq datasets were downloaded from the Blueprint DCC portal under accession …
Nature.com
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