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- IP address: 194.199.235.133
- Location: France
- Latitude: 48.8582
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Websites Listing
We found Websites Listing below when search with sniplay.southgreen.fr on Search Engine
SNiPlay : Home
SNiPlay is part of the South Green bioinformatics platform. Fundings This development was supported and financed by: ANR DLVitis (2009-2014) (ANR-08-GENM-02 : DLVitis project). ANR GnpAsso (2011-2014) (ANR-10-GENM-0006 : GnpAsso project). Publications Dereeper A, Homa F, Andres G, Sempere G, Sarah G, Hueber Y, Dufayard JF, Ruiz M. SNiPlay3: a web-based …
Sniplay.southgreen.frSNiPlay | South Green
Search this site: Partners. Funding partners. Networks . (C) South Green, 2013
Southgreen.frSNiPlay Pipeline V3 - South Green
SNiPlay Pipeline V3. Uploader. Upload: VCF file (Variant Call Format) (max size: 200 Mo) Fasta file for reference sequence (if genome not available below) (optional)
Sniplay.southgreen.frSNiPlay : Manual Pipeline V3
1- Data upload. The process takes VCF genotyping files as input. VCF stands for Variant Call Format, this file format was initially used by the 1000 Genomes project to encode SNPs and other structural genetic variants. This format is further described on the 1000 Genomes project Web site, and be can obtained by SNP calling softwares such as GATK.
Sniplay.southgreen.frContact form | Rice Genome Hub
Rice Genome Hub. Home ; Genomes ; Datasets
Rice-genome-hub.southgreen.frInTreeGreat | South Green
InTreeGreat is a web tree viewer, able to display any Newick formatted or PhyloXML trees. InTreeGreat is able to collapse nodes using the last common …
Southgreen.frTerms of Service | Rice Genome Hub
2019-12-01 · SNiPlay ; Download ; About ... “Hub”– also referred to as a Rice Genome Hub website https://rice-genome-hub.southgreen.fr, means the online mechanism to enable end users to access and use the Data. “We” – means the team in charge of the development and maintenance of the Hub. The Hub is jointly developed by the Cirad and IRD and supported by …
Rice-genome-hub.southgreen.frGeLoc - rice-genome-hub.southgreen.fr
Welcome to GeLoc. Plant resistance genes are mainly encoded by three large Leucine-Rich Repeat (LRR)-containing receptor (LRR-CR) families: the LRR-Receptor-Like Kinase (LRR-RLK), LRR-Receptor-Like Protein (LRR-RLP) and Nucleotide-binding LRR Receptor (NLR). We have proposed manually curated annotations of these genes for reference rice genomes ...
Rice-genome-hub.southgreen.frSynteny Viewer - rice-genome-hub.southgreen.fr
Synteny Viewer. Azucena vs Nipponbare IR64 vs Nipponbare Azucena vs IR64 Basmati vs Nipponbare PR106 vs Nipponbare Natel Boro vs Nipponbare Chao meo ve Nipponbare Gobol sail vs Nipponbare Ketan Nangka vs Nipponbare Khao yai vs Nipponbare Larha mugad vs Nipponbare Lima vs Nipponbare Nipponbare vs Glaberrima. Project: SynVisio : Synteny …
Rice-genome-hub.southgreen.frGalaxy
The Galaxy Project is supported in part by NSF, NHGRI, The Huck Institutes of the Life Sciences, The Institute for CyberScience at Penn State, and Johns Hopkins University.. This is a free, public, internet accessible resource. Data transfer and data storage are not encrypted. If there are restrictions on the way your research data can be stored and used, please consult your local ...
Usegalaxy.orgThe south green bioinformatics platform : [P988] - CORE
As a proof of concept for system interoperability, we recently released the Banana Genome Hub powered by major GMOD components (i.e. Chado, Cmap, Gbrowse, Tripal, Galaxy, Pathway tools) and South Green tools (e.g. GnpAnnot, GreenPhylDB, SNiPlay, TropGeneDB, ESTtik, OryGenesDB). This concept of hub can be extended to other crops as currently done for the …
Core.ac.ukAgronomic Linked Data (AgroLD): A knowledge-based system ...
2018-11-30 · Share this article Share with email Share with twitter Share with linkedin Share with facebook. Abstract . Recent advances in high-throughput technologies have resulted in a tremendous increase in the amount of omics data produced in plant science. This increase, in conjunction with the heterogeneity and variability of the data, presents a major challenge to …
Europepmc.orgExplore SNP polymorphism data A Dereeper G Sarah
Explore SNP polymorphism data A. Dereeper, G. Sarah, F. Sabot Bioinformatics trainings, Vietnam Hanoi,
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